Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Gm44335-201ENSMUST00000196879 141 ntBASIC17.01■□□□□ 0.31
Aldh1a1P24549 Gm44297-201ENSMUST00000198304 141 ntBASIC17.01■□□□□ 0.31
Aldh1a1P24549 Gm44346-201ENSMUST00000198851 141 ntBASIC17.01■□□□□ 0.31
Aldh1a1P24549 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.01■□□□□ 0.31
Aldh1a1P24549 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.01■□□□□ 0.31
Aldh1a1P24549 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Aldh1a1P24549 Gm13597-201ENSMUST00000121239 375 ntBASIC17■□□□□ 0.31
Aldh1a1P24549 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17■□□□□ 0.31
Aldh1a1P24549 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Aldh1a1P24549 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Aldh1a1P24549 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17■□□□□ 0.31
Aldh1a1P24549 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Aldh1a1P24549 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17■□□□□ 0.31
Aldh1a1P24549 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Aldh1a1P24549 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17■□□□□ 0.31
Aldh1a1P24549 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Gm13127-201ENSMUST00000118978 1389 ntBASIC17■□□□□ 0.31
Aldh1a1P24549 Gm13332-201ENSMUST00000120451 1398 ntBASIC17■□□□□ 0.31
Aldh1a1P24549 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Aldh1a1P24549 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.99■□□□□ 0.31
Aldh1a1P24549 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Gm13365-201ENSMUST00000121188 973 ntBASIC16.99■□□□□ 0.31
Aldh1a1P24549 Gm5177-201ENSMUST00000183092 997 ntBASIC16.99■□□□□ 0.31
Aldh1a1P24549 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.99■□□□□ 0.31
Aldh1a1P24549 Gm20949-201ENSMUST00000206478 952 ntBASIC16.99■□□□□ 0.31
Aldh1a1P24549 Gm45747-201ENSMUST00000212203 999 ntBASIC16.99■□□□□ 0.31
Aldh1a1P24549 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.99■□□□□ 0.31
Aldh1a1P24549 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Aldh1a1P24549 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Aldh1a1P24549 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.98■□□□□ 0.31
Aldh1a1P24549 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.98■□□□□ 0.31
Aldh1a1P24549 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Aldh1a1P24549 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms