Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Irf8P23611 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Irf8P23611 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Irf8P23611 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.13■□□□□ 0.33
Irf8P23611 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.13■□□□□ 0.33
Irf8P23611 Gm17971-201ENSMUST00000190239 806 ntBASIC17.13■□□□□ 0.33
Irf8P23611 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.13■□□□□ 0.33
Irf8P23611 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.13■□□□□ 0.33
Irf8P23611 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.13■□□□□ 0.33
Irf8P23611 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.13■□□□□ 0.33
Irf8P23611 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Irf8P23611 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Irf8P23611 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Irf8P23611 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Irf8P23611 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.12■□□□□ 0.33
Irf8P23611 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.12■□□□□ 0.33
Irf8P23611 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.12■□□□□ 0.33
Irf8P23611 Gm18622-201ENSMUST00000219361 595 ntBASIC17.12■□□□□ 0.33
Irf8P23611 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.12■□□□□ 0.33
Irf8P23611 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Irf8P23611 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.12■□□□□ 0.33
Irf8P23611 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.12■□□□□ 0.33
Irf8P23611 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Irf8P23611 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Irf8P23611 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.11■□□□□ 0.33
Irf8P23611 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Irf8P23611 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Gm27459-201ENSMUST00000184860 107 ntBASIC17.11■□□□□ 0.33
Irf8P23611 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.11■□□□□ 0.33
Irf8P23611 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.11■□□□□ 0.33
Irf8P23611 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.11■□□□□ 0.33
Irf8P23611 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Irf8P23611 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Irf8P23611 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.11■□□□□ 0.33
Irf8P23611 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Irf8P23611 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Irf8P23611 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Irf8P23611 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.1■□□□□ 0.33
Irf8P23611 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Irf8P23611 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Irf8P23611 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Irf8P23611 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.1■□□□□ 0.33
Irf8P23611 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf8P23611 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf8P23611 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf8P23611 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Irf8P23611 Dancr-204ENSMUST00000132389 2347 ntBASIC17.09■□□□□ 0.33
Irf8P23611 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Irf8P23611 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Irf8P23611 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Irf8P23611 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms