Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm5177-201ENSMUST00000183092 997 ntBASIC16.33■□□□□ 0.2
Hoxd8P23463 Gm45747-201ENSMUST00000212203 999 ntBASIC16.33■□□□□ 0.2
Hoxd8P23463 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.33■□□□□ 0.2
Hoxd8P23463 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.33■□□□□ 0.2
Hoxd8P23463 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.33■□□□□ 0.2
Hoxd8P23463 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Hoxd8P23463 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.32■□□□□ 0.2
Hoxd8P23463 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hoxd8P23463 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Hoxd8P23463 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Hoxd8P23463 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.32■□□□□ 0.2
Hoxd8P23463 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Hoxd8P23463 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.32■□□□□ 0.2
Hoxd8P23463 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.32■□□□□ 0.2
Hoxd8P23463 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.32■□□□□ 0.2
Hoxd8P23463 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Hoxd8P23463 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hoxd8P23463 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.31■□□□□ 0.2
Hoxd8P23463 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxd8P23463 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.31■□□□□ 0.2
Hoxd8P23463 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxd8P23463 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxd8P23463 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.31■□□□□ 0.2
Hoxd8P23463 Gm45612-201ENSMUST00000211320 160 ntBASIC16.31■□□□□ 0.2
Hoxd8P23463 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hoxd8P23463 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hoxd8P23463 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hoxd8P23463 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Hoxd8P23463 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxd8P23463 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hoxd8P23463 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hoxd8P23463 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Hoxd8P23463 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxd8P23463 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxd8P23463 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hoxd8P23463 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxd8P23463 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.3■□□□□ 0.2
Hoxd8P23463 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxd8P23463 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxd8P23463 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Hoxd8P23463 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxd8P23463 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hoxd8P23463 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxd8P23463 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxd8P23463 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxd8P23463 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hoxd8P23463 Gm15427-201ENSMUST00000117288 531 ntBASIC16.29■□□□□ 0.2
Hoxd8P23463 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms