Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.53□□□□□ -0.08
Cbx3P23198 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Gm7291-201ENSMUST00000199147 382 ntBASIC14.53□□□□□ -0.08
Cbx3P23198 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cbx3P23198 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cbx3P23198 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cbx3P23198 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.53□□□□□ -0.08
Cbx3P23198 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cbx3P23198 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Cbx3P23198 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 App-207ENSMUST00000227737 2827 ntBASIC14.52□□□□□ -0.08
Cbx3P23198 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Flg-201ENSMUST00000050758 1488 ntBASIC14.52□□□□□ -0.08
Cbx3P23198 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cbx3P23198 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cbx3P23198 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Cbx3P23198 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cbx3P23198 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.52□□□□□ -0.09
Cbx3P23198 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.52□□□□□ -0.09
Cbx3P23198 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.52□□□□□ -0.09
Cbx3P23198 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Cbx3P23198 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.52□□□□□ -0.09
Cbx3P23198 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.52□□□□□ -0.09
Cbx3P23198 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cbx3P23198 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Gm10849-201ENSMUST00000100397 618 ntBASIC14.51□□□□□ -0.09
Cbx3P23198 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.51□□□□□ -0.09
Cbx3P23198 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cbx3P23198 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.51□□□□□ -0.09
Cbx3P23198 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cbx3P23198 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cbx3P23198 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.5□□□□□ -0.09
Cbx3P23198 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.5□□□□□ -0.09
Cbx3P23198 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.5□□□□□ -0.09
Cbx3P23198 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cbx3P23198 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cbx3P23198 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.5□□□□□ -0.09
Cbx3P23198 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.5□□□□□ -0.09
Cbx3P23198 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.5□□□□□ -0.09
Cbx3P23198 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Cbx3P23198 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.5□□□□□ -0.09
Cbx3P23198 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.5□□□□□ -0.09
Cbx3P23198 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cbx3P23198 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms