Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Usp53P15975 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp53P15975 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp53P15975 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.37■□□□□ 0.53
Usp53P15975 Gm43514-201ENSMUST00000198852 424 ntBASIC18.37■□□□□ 0.53
Usp53P15975 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp53P15975 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Usp53P15975 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp53P15975 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.36■□□□□ 0.53
Usp53P15975 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp53P15975 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp53P15975 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Gm18206-201ENSMUST00000207027 926 ntBASIC18.36■□□□□ 0.53
Usp53P15975 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.36■□□□□ 0.53
Usp53P15975 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Usp53P15975 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp53P15975 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp53P15975 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Usp53P15975 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp53P15975 Gm1401-201ENSMUST00000122048 772 ntBASIC18.35■□□□□ 0.53
Usp53P15975 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.35■□□□□ 0.53
Usp53P15975 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.35■□□□□ 0.53
Usp53P15975 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Usp53P15975 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Usp53P15975 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp53P15975 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp53P15975 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp53P15975 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp53P15975 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp53P15975 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp53P15975 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.34■□□□□ 0.53
Usp53P15975 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp53P15975 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.34■□□□□ 0.53
Usp53P15975 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp53P15975 Gm6257-201ENSMUST00000163864 910 ntBASIC18.34■□□□□ 0.53
Usp53P15975 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp53P15975 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
Usp53P15975 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.34■□□□□ 0.53
Usp53P15975 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Usp53P15975 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.34■□□□□ 0.53
Usp53P15975 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp53P15975 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Usp53P15975 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp53P15975 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp53P15975 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.33■□□□□ 0.53
Usp53P15975 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Usp53P15975 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp53P15975 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms