Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccl3P10855 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccl3P10855 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccl3P10855 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccl3P10855 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14□□□□□ -0.17
Ccl3P10855 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Ccl3P10855 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14□□□□□ -0.17
Ccl3P10855 Gm8396-201ENSMUST00000057361 823 ntBASIC14□□□□□ -0.17
Ccl3P10855 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14□□□□□ -0.17
Ccl3P10855 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14□□□□□ -0.17
Ccl3P10855 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccl3P10855 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.99□□□□□ -0.17
Ccl3P10855 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.99□□□□□ -0.17
Ccl3P10855 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
Ccl3P10855 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ccl3P10855 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.99□□□□□ -0.17
Ccl3P10855 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.99□□□□□ -0.17
Ccl3P10855 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.99□□□□□ -0.17
Ccl3P10855 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccl3P10855 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ccl3P10855 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.99□□□□□ -0.17
Ccl3P10855 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccl3P10855 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccl3P10855 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccl3P10855 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Ccl3P10855 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Ccl3P10855 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccl3P10855 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccl3P10855 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.98□□□□□ -0.17
Ccl3P10855 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Gm27494-201ENSMUST00000184735 189 ntBASIC13.98□□□□□ -0.17
Ccl3P10855 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.98□□□□□ -0.17
Ccl3P10855 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccl3P10855 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccl3P10855 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccl3P10855 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccl3P10855 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ccl3P10855 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Grk6-207ENSMUST00000225925 2769 ntBASIC13.97□□□□□ -0.17
Ccl3P10855 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ccl3P10855 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Mir1895-201ENSMUST00000122615 79 ntBASIC13.97□□□□□ -0.17
Ccl3P10855 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccl3P10855 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccl3P10855 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ccl3P10855 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccl3P10855 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms