Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc8P09025 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc8P09025 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc8P09025 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc8P09025 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc8P09025 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Hoxc8P09025 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc8P09025 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.84■□□□□ 0.29
Hoxc8P09025 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc8P09025 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc8P09025 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Gm13365-201ENSMUST00000121188 973 ntBASIC16.84■□□□□ 0.29
Hoxc8P09025 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.84■□□□□ 0.29
Hoxc8P09025 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.84■□□□□ 0.29
Hoxc8P09025 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.84■□□□□ 0.29
Hoxc8P09025 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.84■□□□□ 0.29
Hoxc8P09025 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.84■□□□□ 0.29
Hoxc8P09025 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc8P09025 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc8P09025 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc8P09025 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc8P09025 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc8P09025 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc8P09025 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hoxc8P09025 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.83■□□□□ 0.28
Hoxc8P09025 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.83■□□□□ 0.28
Hoxc8P09025 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hoxc8P09025 Rpph1-201ENSMUST00000175096 319 ntBASIC16.83■□□□□ 0.28
Hoxc8P09025 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hoxc8P09025 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.83■□□□□ 0.28
Hoxc8P09025 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.83■□□□□ 0.28
Hoxc8P09025 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.83■□□□□ 0.28
Hoxc8P09025 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.83■□□□□ 0.28
Hoxc8P09025 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Hoxc8P09025 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc8P09025 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.82■□□□□ 0.28
Hoxc8P09025 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.82■□□□□ 0.28
Hoxc8P09025 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Hoxc8P09025 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Hoxc8P09025 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.82■□□□□ 0.28
Hoxc8P09025 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.82■□□□□ 0.28
Hoxc8P09025 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hoxc8P09025 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Hoxc8P09025 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hoxc8P09025 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Gm12008-201ENSMUST00000117791 755 ntBASIC16.81■□□□□ 0.28
Hoxc8P09025 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.81■□□□□ 0.28
Hoxc8P09025 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Gm44872-201ENSMUST00000207864 420 ntBASIC16.81■□□□□ 0.28
Hoxc8P09025 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.81■□□□□ 0.28
Hoxc8P09025 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Hoxc8P09025 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hoxc8P09025 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Hoxc8P09025 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.81■□□□□ 0.28
Hoxc8P09025 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc8P09025 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc8P09025 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Hoxc8P09025 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc8P09025 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Hoxc8P09025 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms