Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.84■□□□□ 0.29
TnfP06804 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
TnfP06804 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.84■□□□□ 0.29
TnfP06804 Gm27628-201ENSMUST00000184911 107 ntBASIC16.84■□□□□ 0.29
TnfP06804 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.84■□□□□ 0.29
TnfP06804 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.84■□□□□ 0.29
TnfP06804 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.84■□□□□ 0.29
TnfP06804 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.84■□□□□ 0.29
TnfP06804 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.84■□□□□ 0.29
TnfP06804 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
TnfP06804 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TnfP06804 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.84■□□□□ 0.29
TnfP06804 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TnfP06804 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.83■□□□□ 0.29
TnfP06804 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
TnfP06804 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TnfP06804 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.83■□□□□ 0.28
TnfP06804 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.83■□□□□ 0.28
TnfP06804 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.83■□□□□ 0.28
TnfP06804 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TnfP06804 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TnfP06804 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TnfP06804 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.82■□□□□ 0.28
TnfP06804 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.82■□□□□ 0.28
TnfP06804 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TnfP06804 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.82■□□□□ 0.28
TnfP06804 Psmb5-202ENSMUST00000227257 622 ntBASIC16.82■□□□□ 0.28
TnfP06804 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TnfP06804 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TnfP06804 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TnfP06804 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.82■□□□□ 0.28
TnfP06804 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TnfP06804 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.82■□□□□ 0.28
TnfP06804 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.81■□□□□ 0.28
TnfP06804 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TnfP06804 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.81■□□□□ 0.28
TnfP06804 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.81■□□□□ 0.28
TnfP06804 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TnfP06804 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TnfP06804 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TnfP06804 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.8■□□□□ 0.28
TnfP06804 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TnfP06804 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TnfP06804 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TnfP06804 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TnfP06804 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TnfP06804 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.8■□□□□ 0.28
TnfP06804 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TnfP06804 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.8■□□□□ 0.28
TnfP06804 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.8■□□□□ 0.28
TnfP06804 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms