Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.99□□□□□ -0.17
P04224 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Gm12441-201ENSMUST00000121806 588 ntBASIC13.99□□□□□ -0.17
P04224 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.99□□□□□ -0.17
P04224 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Trmt13-210ENSMUST00000198454 880 ntBASIC13.99□□□□□ -0.17
P04224 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
P04224 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
P04224 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.99□□□□□ -0.17
P04224 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
P04224 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.99□□□□□ -0.17
P04224 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P04224 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
P04224 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.98□□□□□ -0.17
P04224 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
P04224 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
P04224 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.98□□□□□ -0.17
P04224 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.98□□□□□ -0.17
P04224 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.98□□□□□ -0.17
P04224 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.98□□□□□ -0.17
P04224 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
P04224 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.98□□□□□ -0.17
P04224 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
P04224 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
P04224 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
P04224 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.97□□□□□ -0.17
P04224 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.97□□□□□ -0.17
P04224 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
P04224 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
P04224 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
P04224 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
P04224 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
P04224 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
P04224 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
P04224 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
P04224 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P04224 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P04224 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P04224 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P04224 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
P04224 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.96□□□□□ -0.17
P04224 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P04224 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
P04224 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.96□□□□□ -0.17
P04224 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
P04224 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms