Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.53□□□□□ -0.08
P01852 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
P01852 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
P01852 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.53□□□□□ -0.08
P01852 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.53□□□□□ -0.08
P01852 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
P01852 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
P01852 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
P01852 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.53□□□□□ -0.08
P01852 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
P01852 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P01852 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.52□□□□□ -0.08
P01852 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
P01852 Gm7153-201ENSMUST00000117092 455 ntBASIC14.52□□□□□ -0.09
P01852 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.52□□□□□ -0.09
P01852 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.52□□□□□ -0.09
P01852 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.52□□□□□ -0.09
P01852 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01852 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01852 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.52□□□□□ -0.09
P01852 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.52□□□□□ -0.09
P01852 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.52□□□□□ -0.09
P01852 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
P01852 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01852 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01852 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
P01852 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
P01852 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
P01852 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
P01852 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.52□□□□□ -0.09
P01852 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.52□□□□□ -0.09
P01852 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
P01852 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.51□□□□□ -0.09
P01852 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.51□□□□□ -0.09
P01852 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
P01852 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
P01852 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
P01852 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.51□□□□□ -0.09
P01852 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
P01852 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.5□□□□□ -0.09
P01852 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
P01852 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
P01852 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
P01852 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
P01852 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.5□□□□□ -0.09
P01852 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.5□□□□□ -0.09
P01852 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.5□□□□□ -0.09
P01852 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms