Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01734 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01734 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01734 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01734 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.27■□□□□ 0.36
P01734 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
P01734 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Gm13418-201ENSMUST00000119097 944 ntBASIC17.27■□□□□ 0.36
P01734 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.27■□□□□ 0.36
P01734 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P01734 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01734 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.27■□□□□ 0.35
P01734 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
P01734 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
P01734 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01734 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P01734 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P01734 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.26■□□□□ 0.35
P01734 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.26■□□□□ 0.35
P01734 Gm7862-201ENSMUST00000121461 292 ntBASIC17.26■□□□□ 0.35
P01734 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P01734 Gm4535-201ENSMUST00000182274 558 ntBASIC17.26■□□□□ 0.35
P01734 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.26■□□□□ 0.35
P01734 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
P01734 Gm18622-201ENSMUST00000219361 595 ntBASIC17.26■□□□□ 0.35
P01734 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Gm10355-201ENSMUST00000097146 517 ntBASIC17.26■□□□□ 0.35
P01734 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.26■□□□□ 0.35
P01734 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.26■□□□□ 0.35
P01734 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.26■□□□□ 0.35
P01734 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P01734 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
P01734 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P01734 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
P01734 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
P01734 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
P01734 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.25■□□□□ 0.35
P01734 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
P01734 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.25■□□□□ 0.35
P01734 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.25■□□□□ 0.35
P01734 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.25■□□□□ 0.35
P01734 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.25■□□□□ 0.35
P01734 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01734 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
P01734 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P01734 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
P01734 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
P01734 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
P01734 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.24■□□□□ 0.35
P01734 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
P01734 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P01734 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
P01734 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
P01734 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.24■□□□□ 0.35
P01734 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms