Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Apaf1O88879 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Apaf1O88879 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Apaf1O88879 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.64■□□□□ 0.89
Apaf1O88879 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Gm10060-201ENSMUST00000212002 111 ntBASIC20.63■□□□□ 0.89
Apaf1O88879 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC20.63■□□□□ 0.89
Apaf1O88879 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Apaf1O88879 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Apaf1O88879 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.62■□□□□ 0.89
Apaf1O88879 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Apaf1O88879 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20.62■□□□□ 0.89
Apaf1O88879 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.62■□□□□ 0.89
Apaf1O88879 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Apaf1O88879 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Apaf1O88879 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Apaf1O88879 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Mir5131-201ENSMUST00000175426 93 ntBASIC20.61■□□□□ 0.89
Apaf1O88879 Gm27646-201ENSMUST00000183989 110 ntBASIC20.61■□□□□ 0.89
Apaf1O88879 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Apaf1O88879 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Apaf1O88879 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Apaf1O88879 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.6■□□□□ 0.89
Apaf1O88879 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.6■□□□□ 0.89
Apaf1O88879 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.6■□□□□ 0.89
Apaf1O88879 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.6■□□□□ 0.89
Apaf1O88879 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.6■□□□□ 0.89
Apaf1O88879 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Apaf1O88879 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.6■□□□□ 0.89
Apaf1O88879 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Apaf1O88879 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Apaf1O88879 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.59■□□□□ 0.89
Apaf1O88879 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.59■□□□□ 0.89
Apaf1O88879 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Apaf1O88879 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.59■□□□□ 0.89
Apaf1O88879 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Apaf1O88879 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms