Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.18□□□□□ -0.14
CcnkO88874 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CcnkO88874 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CcnkO88874 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.18□□□□□ -0.14
CcnkO88874 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.18□□□□□ -0.14
CcnkO88874 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CcnkO88874 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.17□□□□□ -0.14
CcnkO88874 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.17□□□□□ -0.14
CcnkO88874 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.17□□□□□ -0.14
CcnkO88874 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.17□□□□□ -0.14
CcnkO88874 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CcnkO88874 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CcnkO88874 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.17□□□□□ -0.14
CcnkO88874 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CcnkO88874 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CcnkO88874 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.16□□□□□ -0.14
CcnkO88874 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CcnkO88874 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CcnkO88874 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.16□□□□□ -0.14
CcnkO88874 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.16□□□□□ -0.14
CcnkO88874 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
CcnkO88874 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CcnkO88874 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
CcnkO88874 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CcnkO88874 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CcnkO88874 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CcnkO88874 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.15□□□□□ -0.14
CcnkO88874 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.15□□□□□ -0.14
CcnkO88874 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Gm2274-201ENSMUST00000184539 609 ntBASIC14.15□□□□□ -0.14
CcnkO88874 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CcnkO88874 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
CcnkO88874 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.15
CcnkO88874 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CcnkO88874 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CcnkO88874 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcnkO88874 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms