Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Best1O88870 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.24■□□□□ 0.03
Best1O88870 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Best1O88870 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Best1O88870 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Best1O88870 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.23■□□□□ 0.03
Best1O88870 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.23■□□□□ 0.03
Best1O88870 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.23■□□□□ 0.03
Best1O88870 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
Best1O88870 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Best1O88870 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.23■□□□□ 0.03
Best1O88870 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Best1O88870 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Best1O88870 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Best1O88870 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Best1O88870 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Best1O88870 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.22■□□□□ 0.03
Best1O88870 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.22■□□□□ 0.03
Best1O88870 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Best1O88870 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Gm18489-201ENSMUST00000172565 551 ntBASIC15.22■□□□□ 0.03
Best1O88870 Gm27525-201ENSMUST00000184465 107 ntBASIC15.22■□□□□ 0.03
Best1O88870 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.22■□□□□ 0.03
Best1O88870 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.22■□□□□ 0.03
Best1O88870 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.22■□□□□ 0.03
Best1O88870 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.22■□□□□ 0.03
Best1O88870 Gm5364-201ENSMUST00000216789 889 ntBASIC15.22■□□□□ 0.03
Best1O88870 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.22■□□□□ 0.03
Best1O88870 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Best1O88870 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.22■□□□□ 0.03
Best1O88870 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.22■□□□□ 0.03
Best1O88870 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Best1O88870 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Best1O88870 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Best1O88870 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Best1O88870 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Best1O88870 Gm14140-201ENSMUST00000119999 995 ntBASIC15.21■□□□□ 0.03
Best1O88870 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.21■□□□□ 0.03
Best1O88870 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.21■□□□□ 0.03
Best1O88870 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.21■□□□□ 0.03
Best1O88870 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.21■□□□□ 0.03
Best1O88870 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Best1O88870 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.21■□□□□ 0.03
Best1O88870 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms