Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Cops3O88543 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.27□□□□□ -0.12
Cops3O88543 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.27□□□□□ -0.12
Cops3O88543 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Cops3O88543 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cops3O88543 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cops3O88543 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.27□□□□□ -0.13
Cops3O88543 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Cops3O88543 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cops3O88543 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
Cops3O88543 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cops3O88543 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Cops3O88543 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cops3O88543 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cops3O88543 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cops3O88543 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.26□□□□□ -0.13
Cops3O88543 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.26□□□□□ -0.13
Cops3O88543 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cops3O88543 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cops3O88543 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.25□□□□□ -0.13
Cops3O88543 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.25□□□□□ -0.13
Cops3O88543 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.25□□□□□ -0.13
Cops3O88543 Gm37055-201ENSMUST00000191866 133 ntBASIC14.25□□□□□ -0.13
Cops3O88543 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cops3O88543 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cops3O88543 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Cops3O88543 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cops3O88543 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Cops3O88543 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cops3O88543 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.24□□□□□ -0.13
Cops3O88543 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms