Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tgfbr3O88393 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.07■□□□□ 0
Tgfbr3O88393 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.07■□□□□ 0
Tgfbr3O88393 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tgfbr3O88393 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.07■□□□□ 0
Tgfbr3O88393 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.07■□□□□ 0
Tgfbr3O88393 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.07■□□□□ 0
Tgfbr3O88393 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.07■□□□□ 0
Tgfbr3O88393 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.07■□□□□ 0
Tgfbr3O88393 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tgfbr3O88393 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.06■□□□□ 0
Tgfbr3O88393 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.06■□□□□ 0
Tgfbr3O88393 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.06■□□□□ 0
Tgfbr3O88393 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.06■□□□□ 0
Tgfbr3O88393 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.06■□□□□ 0
Tgfbr3O88393 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.06■□□□□ 0
Tgfbr3O88393 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Tgfbr3O88393 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.06■□□□□ 0
Tgfbr3O88393 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tgfbr3O88393 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tgfbr3O88393 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Tgfbr3O88393 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Tgfbr3O88393 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Tgfbr3O88393 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.05■□□□□ 0
Tgfbr3O88393 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.05■□□□□ -0
Tgfbr3O88393 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.05■□□□□ -0
Tgfbr3O88393 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Tgfbr3O88393 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.05■□□□□ -0
Tgfbr3O88393 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Tgfbr3O88393 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Tgfbr3O88393 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Gm14701-201ENSMUST00000117156 348 ntBASIC15.04■□□□□ -0
Tgfbr3O88393 Gm15920-201ENSMUST00000118998 402 ntBASIC15.04■□□□□ -0
Tgfbr3O88393 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.04■□□□□ -0
Tgfbr3O88393 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.04■□□□□ -0
Tgfbr3O88393 Gm7063-201ENSMUST00000186840 981 ntBASIC15.04■□□□□ -0
Tgfbr3O88393 Gm44492-201ENSMUST00000197012 141 ntBASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms