Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ttc3O88196 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.57■□□□□ 0.24
Ttc3O88196 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.57■□□□□ 0.24
Ttc3O88196 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ttc3O88196 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.57■□□□□ 0.24
Ttc3O88196 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.57■□□□□ 0.24
Ttc3O88196 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ttc3O88196 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Ttc3O88196 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ttc3O88196 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ttc3O88196 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.56■□□□□ 0.24
Ttc3O88196 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.56■□□□□ 0.24
Ttc3O88196 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Ttc3O88196 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Ttc3O88196 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ttc3O88196 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ttc3O88196 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Gm27397-201ENSMUST00000184997 107 ntBASIC16.55■□□□□ 0.24
Ttc3O88196 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ttc3O88196 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.55■□□□□ 0.24
Ttc3O88196 Gm7787-201ENSMUST00000216858 688 ntBASIC16.55■□□□□ 0.24
Ttc3O88196 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.55■□□□□ 0.24
Ttc3O88196 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ttc3O88196 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.55■□□□□ 0.24
Ttc3O88196 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ttc3O88196 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.54■□□□□ 0.24
Ttc3O88196 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.54■□□□□ 0.24
Ttc3O88196 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ttc3O88196 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ttc3O88196 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ttc3O88196 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ttc3O88196 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ttc3O88196 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms