Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Sigmar1O55242 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sigmar1O55242 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Efs-202ENSMUST00000227037 2540 ntBASIC11.02□□□□□ -0.64
Sigmar1O55242 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sigmar1O55242 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sigmar1O55242 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.02□□□□□ -0.65
Sigmar1O55242 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.02□□□□□ -0.65
Sigmar1O55242 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sigmar1O55242 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sigmar1O55242 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Sigmar1O55242 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Sigmar1O55242 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.01□□□□□ -0.65
Sigmar1O55242 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.01□□□□□ -0.65
Sigmar1O55242 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Sigmar1O55242 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms