Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Rpl35aO55142 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Gm7153-201ENSMUST00000117092 455 ntBASIC11.83□□□□□ -0.52
Rpl35aO55142 Gm13216-201ENSMUST00000117145 591 ntBASIC11.83□□□□□ -0.52
Rpl35aO55142 Gm12644-201ENSMUST00000119935 606 ntBASIC11.83□□□□□ -0.52
Rpl35aO55142 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.83□□□□□ -0.52
Rpl35aO55142 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.83□□□□□ -0.52
Rpl35aO55142 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Rpl35aO55142 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.83□□□□□ -0.52
Rpl35aO55142 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rpl35aO55142 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.83□□□□□ -0.52
Rpl35aO55142 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rpl35aO55142 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.83□□□□□ -0.52
Rpl35aO55142 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Rpl35aO55142 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rpl35aO55142 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Gm44454-201ENSMUST00000198541 138 ntBASIC11.82□□□□□ -0.52
Rpl35aO55142 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rpl35aO55142 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rpl35aO55142 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpl35aO55142 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.81□□□□□ -0.52
Rpl35aO55142 Gm15165-201ENSMUST00000118140 502 ntBASIC11.81□□□□□ -0.52
Rpl35aO55142 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rpl35aO55142 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Rpl35aO55142 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Rpl35aO55142 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Rpl35aO55142 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC11.81□□□□□ -0.52
Rpl35aO55142 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.81□□□□□ -0.52
Rpl35aO55142 Gm43347-201ENSMUST00000200226 580 ntBASIC11.81□□□□□ -0.52
Rpl35aO55142 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.81□□□□□ -0.52
Rpl35aO55142 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpl35aO55142 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms