Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
Sdc4O35988 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.35■□□□□ 0.21
Sdc4O35988 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Gm7222-201ENSMUST00000117512 906 ntBASIC16.35■□□□□ 0.21
Sdc4O35988 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.35■□□□□ 0.21
Sdc4O35988 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.35■□□□□ 0.21
Sdc4O35988 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.35■□□□□ 0.21
Sdc4O35988 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sdc4O35988 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Sdc4O35988 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sdc4O35988 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.34■□□□□ 0.21
Sdc4O35988 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Sdc4O35988 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Gm1401-201ENSMUST00000122048 772 ntBASIC16.34■□□□□ 0.21
Sdc4O35988 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.34■□□□□ 0.21
Sdc4O35988 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
Sdc4O35988 Gm6550-201ENSMUST00000187574 993 ntBASIC16.34■□□□□ 0.21
Sdc4O35988 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Sdc4O35988 AV026068-213ENSMUST00000223675 1171 ntBASIC16.34■□□□□ 0.21
Sdc4O35988 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.34■□□□□ 0.21
Sdc4O35988 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.34■□□□□ 0.21
Sdc4O35988 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sdc4O35988 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sdc4O35988 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sdc4O35988 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc4O35988 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc4O35988 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Sdc4O35988 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc4O35988 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.33■□□□□ 0.2
Sdc4O35988 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc4O35988 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sdc4O35988 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Sdc4O35988 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.33■□□□□ 0.2
Sdc4O35988 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.33■□□□□ 0.2
Sdc4O35988 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.33■□□□□ 0.2
Sdc4O35988 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc4O35988 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc4O35988 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc4O35988 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sdc4O35988 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.33■□□□□ 0.2
Sdc4O35988 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc4O35988 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc4O35988 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc4O35988 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.33■□□□□ 0.2
Sdc4O35988 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.33■□□□□ 0.2
Sdc4O35988 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
Sdc4O35988 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sdc4O35988 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.32■□□□□ 0.2
Sdc4O35988 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Sdc4O35988 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sdc4O35988 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.32■□□□□ 0.2
Sdc4O35988 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Sdc4O35988 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.32■□□□□ 0.2
Sdc4O35988 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sdc4O35988 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Sdc4O35988 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sdc4O35988 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Sdc4O35988 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc4O35988 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc4O35988 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc4O35988 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sdc4O35988 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc4O35988 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.31■□□□□ 0.2
Sdc4O35988 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms