Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Per1O35973 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Gm1401-201ENSMUST00000122048 772 ntBASIC17.2■□□□□ 0.34
Per1O35973 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.2■□□□□ 0.34
Per1O35973 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Per1O35973 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.2■□□□□ 0.34
Per1O35973 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Per1O35973 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Per1O35973 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.19■□□□□ 0.34
Per1O35973 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.19■□□□□ 0.34
Per1O35973 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Gm6443-201ENSMUST00000203599 874 ntBASIC17.19■□□□□ 0.34
Per1O35973 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Gm15590-201ENSMUST00000078419 552 ntBASIC17.19■□□□□ 0.34
Per1O35973 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.19■□□□□ 0.34
Per1O35973 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Per1O35973 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Per1O35973 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Gm14722-201ENSMUST00000118943 689 ntBASIC17.18■□□□□ 0.34
Per1O35973 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.18■□□□□ 0.34
Per1O35973 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.18■□□□□ 0.34
Per1O35973 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.18■□□□□ 0.34
Per1O35973 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Per1O35973 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.18■□□□□ 0.34
Per1O35973 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Per1O35973 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Per1O35973 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Per1O35973 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Per1O35973 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Per1O35973 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.17■□□□□ 0.34
Per1O35973 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.17■□□□□ 0.34
Per1O35973 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.17■□□□□ 0.34
Per1O35973 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.17■□□□□ 0.34
Per1O35973 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.17■□□□□ 0.34
Per1O35973 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Per1O35973 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Per1O35973 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.17■□□□□ 0.34
Per1O35973 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Per1O35973 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Per1O35973 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Per1O35973 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Per1O35973 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.16■□□□□ 0.34
Per1O35973 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Per1O35973 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms