Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.27■□□□□ 0.2
Ercc2O08811 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ercc2O08811 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.27■□□□□ 0.2
Ercc2O08811 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.27■□□□□ 0.2
Ercc2O08811 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.27■□□□□ 0.2
Ercc2O08811 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ercc2O08811 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ercc2O08811 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Ercc2O08811 Gm28033-201ENSMUST00000184224 96 ntBASIC16.26■□□□□ 0.19
Ercc2O08811 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.26■□□□□ 0.19
Ercc2O08811 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.26■□□□□ 0.19
Ercc2O08811 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ercc2O08811 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ercc2O08811 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ercc2O08811 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.25■□□□□ 0.19
Ercc2O08811 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ercc2O08811 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ercc2O08811 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.25■□□□□ 0.19
Ercc2O08811 Gm25745-201ENSMUST00000174945 133 ntBASIC16.25■□□□□ 0.19
Ercc2O08811 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ercc2O08811 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ercc2O08811 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.25■□□□□ 0.19
Ercc2O08811 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ercc2O08811 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.25■□□□□ 0.19
Ercc2O08811 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ercc2O08811 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.24■□□□□ 0.19
Ercc2O08811 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.24■□□□□ 0.19
Ercc2O08811 Gm9103-201ENSMUST00000119371 405 ntBASIC16.24■□□□□ 0.19
Ercc2O08811 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.24■□□□□ 0.19
Ercc2O08811 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ercc2O08811 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.24■□□□□ 0.19
Ercc2O08811 Gm6257-201ENSMUST00000163864 910 ntBASIC16.24■□□□□ 0.19
Ercc2O08811 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Ercc2O08811 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.24■□□□□ 0.19
Ercc2O08811 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Ercc2O08811 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ercc2O08811 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.24■□□□□ 0.19
Ercc2O08811 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms