Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tcof1O08784 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Tcof1O08784 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Gm11780-201ENSMUST00000136880 516 ntBASIC18.56■□□□□ 0.56
Tcof1O08784 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Tcof1O08784 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.56■□□□□ 0.56
Tcof1O08784 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.56■□□□□ 0.56
Tcof1O08784 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tcof1O08784 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tcof1O08784 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Tcof1O08784 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Tcof1O08784 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Gm25990-201ENSMUST00000102440 86 ntBASIC18.55■□□□□ 0.56
Tcof1O08784 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.55■□□□□ 0.56
Tcof1O08784 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tcof1O08784 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.55■□□□□ 0.56
Tcof1O08784 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tcof1O08784 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.55■□□□□ 0.56
Tcof1O08784 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tcof1O08784 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tcof1O08784 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Gm8655-201ENSMUST00000221159 852 ntBASIC18.54■□□□□ 0.56
Tcof1O08784 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.54■□□□□ 0.56
Tcof1O08784 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Tcof1O08784 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tcof1O08784 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.53■□□□□ 0.56
Tcof1O08784 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.53■□□□□ 0.56
Tcof1O08784 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.53■□□□□ 0.56
Tcof1O08784 Gm18622-201ENSMUST00000219361 595 ntBASIC18.53■□□□□ 0.56
Tcof1O08784 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.53■□□□□ 0.56
Tcof1O08784 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.53■□□□□ 0.56
Tcof1O08784 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.53■□□□□ 0.56
Tcof1O08784 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Tcof1O08784 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tcof1O08784 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.53■□□□□ 0.56
Tcof1O08784 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tcof1O08784 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm8825-201ENSMUST00000182565 998 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm4518-201ENSMUST00000182638 718 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.52■□□□□ 0.56
Tcof1O08784 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tcof1O08784 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms