Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Polr2jO08740 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.27■□□□□ 0.04
Polr2jO08740 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Polr2jO08740 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.27■□□□□ 0.04
Polr2jO08740 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2jO08740 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2jO08740 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Polr2jO08740 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.27■□□□□ 0.03
Polr2jO08740 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2jO08740 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2jO08740 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2jO08740 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.27■□□□□ 0.03
Polr2jO08740 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2jO08740 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.27■□□□□ 0.03
Polr2jO08740 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Polr2jO08740 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Polr2jO08740 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.26■□□□□ 0.03
Polr2jO08740 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Polr2jO08740 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.26■□□□□ 0.03
Polr2jO08740 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.26■□□□□ 0.03
Polr2jO08740 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.26■□□□□ 0.03
Polr2jO08740 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.26■□□□□ 0.03
Polr2jO08740 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Polr2jO08740 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Polr2jO08740 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.25■□□□□ 0.03
Polr2jO08740 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.25■□□□□ 0.03
Polr2jO08740 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.25■□□□□ 0.03
Polr2jO08740 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.25■□□□□ 0.03
Polr2jO08740 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.25■□□□□ 0.03
Polr2jO08740 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Polr2jO08740 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.24■□□□□ 0.03
Polr2jO08740 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Polr2jO08740 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.24■□□□□ 0.03
Polr2jO08740 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.24■□□□□ 0.03
Polr2jO08740 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.24■□□□□ 0.03
Polr2jO08740 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.24■□□□□ 0.03
Polr2jO08740 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.24■□□□□ 0.03
Polr2jO08740 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.24■□□□□ 0.03
Polr2jO08740 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Polr2jO08740 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms