Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tnfrsf11bO08712 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tnfrsf11bO08712 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tnfrsf11bO08712 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Gm10231-201ENSMUST00000181584 441 ntBASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Mir6404-201ENSMUST00000183699 94 ntBASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Gm5587-201ENSMUST00000206270 674 ntBASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Gm10175-202ENSMUST00000208752 441 ntBASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Asic1-205ENSMUST00000228185 1818 ntBASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tnfrsf11bO08712 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Tnfrsf11bO08712 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tnfrsf11bO08712 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms