Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm19164-201ENSMUST00000210667 640 ntBASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim34bJ3QNR8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim34bJ3QNR8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim34bJ3QNR8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim34bJ3QNR8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim34bJ3QNR8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Gm45167-201ENSMUST00000208007 322 ntBASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim34bJ3QNR8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim34bJ3QNR8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34bJ3QNR8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34bJ3QNR8 Gm6736-201ENSMUST00000166583 948 ntBASIC19.35■□□□□ 0.69
Trim34bJ3QNR8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim34bJ3QNR8 Gm27702-201ENSMUST00000184512 56 ntBASIC19.35■□□□□ 0.69
Trim34bJ3QNR8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34bJ3QNR8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim34bJ3QNR8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms