Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim55G3X8Y1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim55G3X8Y1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim55G3X8Y1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim55G3X8Y1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim55G3X8Y1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 App-207ENSMUST00000227737 2827 ntBASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Gm13401-201ENSMUST00000117074 291 ntBASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Gm38285-201ENSMUST00000192928 922 ntBASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim55G3X8Y1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Trim55G3X8Y1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trim55G3X8Y1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
Trim55G3X8Y1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim55G3X8Y1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trim55G3X8Y1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim55G3X8Y1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Gm27011-201ENSMUST00000182352 972 ntBASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim55G3X8Y1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim55G3X8Y1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms