Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Gm25948-201ENSMUST00000175334 112 ntBASIC19.05■□□□□ 0.64
NpcdF8VQB8 Mir6404-201ENSMUST00000183699 94 ntBASIC19.05■□□□□ 0.64
NpcdF8VQB8 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.05■□□□□ 0.64
NpcdF8VQB8 Mir6977-201ENSMUST00000184960 64 ntBASIC19.05■□□□□ 0.64
NpcdF8VQB8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.05■□□□□ 0.64
NpcdF8VQB8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NpcdF8VQB8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.04■□□□□ 0.64
NpcdF8VQB8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.04■□□□□ 0.64
NpcdF8VQB8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Gm27301-201ENSMUST00000184012 127 ntBASIC19.04■□□□□ 0.64
NpcdF8VQB8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NpcdF8VQB8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Gm11424-201ENSMUST00000121929 829 ntBASIC19.03■□□□□ 0.64
NpcdF8VQB8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Mir6990-201ENSMUST00000183724 91 ntBASIC19.03■□□□□ 0.64
NpcdF8VQB8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Gm7787-201ENSMUST00000216858 688 ntBASIC19.03■□□□□ 0.64
NpcdF8VQB8 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.03■□□□□ 0.64
NpcdF8VQB8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC19.03■□□□□ 0.64
NpcdF8VQB8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NpcdF8VQB8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.02■□□□□ 0.64
NpcdF8VQB8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Gm36967-201ENSMUST00000193814 266 ntBASIC19.02■□□□□ 0.64
NpcdF8VQB8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NpcdF8VQB8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NpcdF8VQB8 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.02■□□□□ 0.63
NpcdF8VQB8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
NpcdF8VQB8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms