Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Herc1E9PZP8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Herc1E9PZP8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Herc1E9PZP8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Herc1E9PZP8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -1
Herc1E9PZP8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -1
Herc1E9PZP8 Gm12008-201ENSMUST00000117791 755 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm28760-201ENSMUST00000185995 736 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC8.83□□□□□ -1
Herc1E9PZP8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Herc1E9PZP8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm5940-201ENSMUST00000117582 1068 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.83□□□□□ -1
Herc1E9PZP8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm37986-201ENSMUST00000193285 383 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 AC110817.1-201ENSMUST00000225706 605 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 Gm7399-201ENSMUST00000032395 858 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Herc1E9PZP8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC8.83□□□□□ -1
Herc1E9PZP8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm12390-201ENSMUST00000117897 397 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC8.83□□□□□ -1
Herc1E9PZP8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Gm17383-201ENSMUST00000078739 1041 ntBASIC8.83□□□□□ -1
Herc1E9PZP8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Herc1E9PZP8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC8.82□□□□□ -1
Herc1E9PZP8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 AC134335.2-201ENSMUST00000227660 440 ntBASIC8.82□□□□□ -1
Herc1E9PZP8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC8.82□□□□□ -1
Herc1E9PZP8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC8.82□□□□□ -1
Herc1E9PZP8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Herc1E9PZP8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Gm22334-201ENSMUST00000158070 133 ntBASIC8.82□□□□□ -1
Herc1E9PZP8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC8.82□□□□□ -1
Herc1E9PZP8 AC155252.1-201ENSMUST00000226462 1208 ntBASIC8.82□□□□□ -1
Herc1E9PZP8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Gm11620-201ENSMUST00000118770 1845 ntBASIC8.82□□□□□ -1
Herc1E9PZP8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Herc1E9PZP8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 AC126253.1-201ENSMUST00000227974 824 ntBASIC8.82□□□□□ -1
Herc1E9PZP8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Herc1E9PZP8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC8.81□□□□□ -1
Herc1E9PZP8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC8.81□□□□□ -1
Herc1E9PZP8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC8.81□□□□□ -1
Herc1E9PZP8 Gm18049-201ENSMUST00000208909 581 ntBASIC8.81□□□□□ -1
Herc1E9PZP8 AC151836.1-202ENSMUST00000226259 753 ntBASIC8.81□□□□□ -1
Herc1E9PZP8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Herc1E9PZP8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.81□□□□□ -1
Herc1E9PZP8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Herc1E9PZP8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Herc1E9PZP8 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms