Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Mir7070-201ENSMUST00000183657 86 ntBASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.78■□□□□ 0.12
Col6a3E9PWQ3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col6a3E9PWQ3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Gm45784-201ENSMUST00000188360 142 ntBASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.77■□□□□ 0.11
Col6a3E9PWQ3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 BC021767-201ENSMUST00000126387 1716 ntBASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Mir6404-201ENSMUST00000183699 94 ntBASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Gm27533-201ENSMUST00000183800 152 ntBASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col6a3E9PWQ3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Gm18766-201ENSMUST00000189811 808 ntBASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col6a3E9PWQ3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm44344-201ENSMUST00000200287 129 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm18056-201ENSMUST00000207670 568 ntBASIC15.74■□□□□ 0.11
Col6a3E9PWQ3 Gm18061-201ENSMUST00000208350 562 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms