Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Gm7488-201ENSMUST00000117148 684 ntBASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Gm17837-201ENSMUST00000186435 985 ntBASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Gm19164-201ENSMUST00000210667 640 ntBASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slc4a9E9PUP3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Gm7730-201ENSMUST00000212486 454 ntBASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Slc4a9E9PUP3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Gm9794-201ENSMUST00000202370 423 ntBASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.35■□□□□ 0.53
Slc4a9E9PUP3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Gm16198-201ENSMUST00000118766 670 ntBASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Gm38294-201ENSMUST00000192831 381 ntBASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc4a9E9PUP3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a9E9PUP3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a9E9PUP3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a9E9PUP3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a9E9PUP3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a9E9PUP3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc4a9E9PUP3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 Gm12008-201ENSMUST00000117791 755 ntBASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc4a9E9PUP3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Gm13453-201ENSMUST00000118708 357 ntBASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Gm12490-201ENSMUST00000120255 560 ntBASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc4a9E9PUP3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms