Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Gm9013-201ENSMUST00000132939 882 ntBASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Gm5878E9PUB3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Gm5878E9PUB3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm5878E9PUB3 BC043934-202ENSMUST00000185694 2356 ntBASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm5878E9PUB3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm5878E9PUB3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm5878E9PUB3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms