Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Syce3B5KM66 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Syce3B5KM66 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Syce3B5KM66 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.26■□□□□ 0.51
Syce3B5KM66 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Syce3B5KM66 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Syce3B5KM66 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Syce3B5KM66 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syce3B5KM66 Gm5643-201ENSMUST00000117081 966 ntBASIC18.25■□□□□ 0.51
Syce3B5KM66 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.25■□□□□ 0.51
Syce3B5KM66 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syce3B5KM66 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.25■□□□□ 0.51
Syce3B5KM66 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syce3B5KM66 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syce3B5KM66 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Syce3B5KM66 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syce3B5KM66 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Syce3B5KM66 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.24■□□□□ 0.51
Syce3B5KM66 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Syce3B5KM66 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Syce3B5KM66 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Syce3B5KM66 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.23■□□□□ 0.51
Syce3B5KM66 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Syce3B5KM66 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.23■□□□□ 0.51
Syce3B5KM66 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.23■□□□□ 0.51
Syce3B5KM66 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Syce3B5KM66 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.23■□□□□ 0.51
Syce3B5KM66 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Syce3B5KM66 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Syce3B5KM66 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Syce3B5KM66 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.22■□□□□ 0.51
Syce3B5KM66 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
Syce3B5KM66 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Syce3B5KM66 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Syce3B5KM66 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.22■□□□□ 0.51
Syce3B5KM66 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.22■□□□□ 0.51
Syce3B5KM66 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.22■□□□□ 0.51
Syce3B5KM66 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Gm18421-201ENSMUST00000204122 625 ntBASIC18.22■□□□□ 0.51
Syce3B5KM66 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.22■□□□□ 0.51
Syce3B5KM66 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Syce3B5KM66 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Syce3B5KM66 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Syce3B5KM66 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.21■□□□□ 0.51
Syce3B5KM66 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.21■□□□□ 0.51
Syce3B5KM66 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.21■□□□□ 0.51
Syce3B5KM66 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Syce3B5KM66 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Syce3B5KM66 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Syce3B5KM66 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms