Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Gm12887B1AVM1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Gm18666-201ENSMUST00000190039 958 ntBASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm12887B1AVM1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Gm12933-201ENSMUST00000120203 872 ntBASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm12887B1AVM1 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm12887B1AVM1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm12887B1AVM1 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.9□□□□□ -0.35
Gm12887B1AVM1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Gm38027-201ENSMUST00000192315 235 ntBASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm12887B1AVM1 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms