Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Mir5122-201ENSMUST00000175004 89 ntBASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Gm11127A7VMS2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Gm11127A7VMS2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Gm11127A7VMS2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms