Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chd6A3KFM7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Chd6A3KFM7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.83□□□□□ -0.36
Chd6A3KFM7 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.83□□□□□ -0.36
Chd6A3KFM7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.83□□□□□ -0.36
Chd6A3KFM7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Chd6A3KFM7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Gm8344-201ENSMUST00000119813 856 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Gm7775-201ENSMUST00000218871 853 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Gm7593-201ENSMUST00000187246 644 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Olfr582-201ENSMUST00000098212 960 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Gm6888-201ENSMUST00000221983 706 ntBASIC12.82□□□□□ -0.36
Chd6A3KFM7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chd6A3KFM7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Gm13392-201ENSMUST00000117708 150 ntBASIC12.81□□□□□ -0.36
Chd6A3KFM7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.81□□□□□ -0.36
Chd6A3KFM7 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.81□□□□□ -0.36
Chd6A3KFM7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.81□□□□□ -0.36
Chd6A3KFM7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Mir1982-201ENSMUST00000157368 74 ntBASIC12.81□□□□□ -0.36
Chd6A3KFM7 Gm18018-201ENSMUST00000198273 408 ntBASIC12.81□□□□□ -0.36
Chd6A3KFM7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chd6A3KFM7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chd6A3KFM7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms