Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.36□□□□□ -0.27
Col6a4A2AX52 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Col6a4A2AX52 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.35□□□□□ -0.27
Col6a4A2AX52 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.35□□□□□ -0.27
Col6a4A2AX52 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Gm8825-201ENSMUST00000182565 998 ntBASIC13.35□□□□□ -0.27
Col6a4A2AX52 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a4A2AX52 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Gm13597-201ENSMUST00000121239 375 ntBASIC13.34□□□□□ -0.27
Col6a4A2AX52 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.34□□□□□ -0.27
Col6a4A2AX52 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a4A2AX52 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a4A2AX52 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Gm4899-201ENSMUST00000178708 719 ntBASIC13.33□□□□□ -0.28
Col6a4A2AX52 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a4A2AX52 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a4A2AX52 Mir7023-201ENSMUST00000185093 64 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms