Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn1aA2APX8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.59■□□□□ 0.25
Scn1aA2APX8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.59■□□□□ 0.25
Scn1aA2APX8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn1aA2APX8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Gm4995-201ENSMUST00000117247 432 ntBASIC16.58■□□□□ 0.25
Scn1aA2APX8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.58■□□□□ 0.25
Scn1aA2APX8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.58■□□□□ 0.25
Scn1aA2APX8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn1aA2APX8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.58■□□□□ 0.24
Scn1aA2APX8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.58■□□□□ 0.24
Scn1aA2APX8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn1aA2APX8 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.57■□□□□ 0.24
Scn1aA2APX8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm11779-201ENSMUST00000118541 368 ntBASIC16.57■□□□□ 0.24
Scn1aA2APX8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn1aA2APX8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Scn1aA2APX8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.56■□□□□ 0.24
Scn1aA2APX8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn1aA2APX8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms