Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gm7787-201ENSMUST00000216858 688 ntBASIC8.31□□□□□ -1.08
Ubr4A2AN08 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gm43058-201ENSMUST00000197645 625 ntBASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gm43378-201ENSMUST00000199336 582 ntBASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gm20445-201ENSMUST00000061905 565 ntBASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Asic1-205ENSMUST00000228185 1818 ntBASIC8.31□□□□□ -1.08
Ubr4A2AN08 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC8.31□□□□□ -1.08
Ubr4A2AN08 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Ubr4A2AN08 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Gm8566-201ENSMUST00000120174 465 ntBASIC8.3□□□□□ -1.08
Ubr4A2AN08 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC8.3□□□□□ -1.08
Ubr4A2AN08 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 AC151836.1-202ENSMUST00000226259 753 ntBASIC8.3□□□□□ -1.08
Ubr4A2AN08 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Snora78-201ENSMUST00000158630 128 ntBASIC8.3□□□□□ -1.08
Ubr4A2AN08 Gm18556-201ENSMUST00000219748 1031 ntBASIC8.3□□□□□ -1.08
Ubr4A2AN08 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 AC124457.1-201ENSMUST00000198845 120 ntBASIC8.3□□□□□ -1.08
Ubr4A2AN08 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Ubr4A2AN08 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Gm38225-201ENSMUST00000194001 393 ntBASIC8.29□□□□□ -1.08
Ubr4A2AN08 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Ubr4A2AN08 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms