Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd7A2AJK6 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd7A2AJK6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chd7A2AJK6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Gm44855-201ENSMUST00000205725 362 ntBASIC15.49■□□□□ 0.07
Chd7A2AJK6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Gm19164-201ENSMUST00000210667 640 ntBASIC15.49■□□□□ 0.07
Chd7A2AJK6 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.49■□□□□ 0.07
Chd7A2AJK6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.49■□□□□ 0.07
Chd7A2AJK6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chd7A2AJK6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.48■□□□□ 0.07
Chd7A2AJK6 Gm12138-201ENSMUST00000122180 951 ntBASIC15.48■□□□□ 0.07
Chd7A2AJK6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.48■□□□□ 0.07
Chd7A2AJK6 Gm10154-201ENSMUST00000084445 354 ntBASIC15.48■□□□□ 0.07
Chd7A2AJK6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.48■□□□□ 0.07
Chd7A2AJK6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chd7A2AJK6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Haglr-201ENSMUST00000100000 2085 ntBASIC15.47■□□□□ 0.07
Chd7A2AJK6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.47■□□□□ 0.07
Chd7A2AJK6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.46■□□□□ 0.07
Chd7A2AJK6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Gm27680-201ENSMUST00000184192 160 ntBASIC15.46■□□□□ 0.07
Chd7A2AJK6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chd7A2AJK6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Chd7A2AJK6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chd7A2AJK6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Chd7A2AJK6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chd7A2AJK6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chd7A2AJK6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms