Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
IsxA1A546 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.83□□□□□ -0.04
IsxA1A546 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.83□□□□□ -0.04
IsxA1A546 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
IsxA1A546 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
IsxA1A546 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.82□□□□□ -0.04
IsxA1A546 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.82□□□□□ -0.04
IsxA1A546 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Gm5643-201ENSMUST00000117081 966 ntBASIC14.82□□□□□ -0.04
IsxA1A546 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.82□□□□□ -0.04
IsxA1A546 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.82□□□□□ -0.04
IsxA1A546 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
IsxA1A546 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
IsxA1A546 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.82□□□□□ -0.04
IsxA1A546 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.82□□□□□ -0.04
IsxA1A546 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
IsxA1A546 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.82□□□□□ -0.04
IsxA1A546 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
IsxA1A546 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IsxA1A546 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.81□□□□□ -0.04
IsxA1A546 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
IsxA1A546 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
IsxA1A546 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
IsxA1A546 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.81□□□□□ -0.04
IsxA1A546 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IsxA1A546 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
IsxA1A546 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
IsxA1A546 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.8□□□□□ -0.04
IsxA1A546 Gm10252-201ENSMUST00000209541 832 ntBASIC14.8□□□□□ -0.04
IsxA1A546 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
IsxA1A546 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
IsxA1A546 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
IsxA1A546 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
IsxA1A546 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms