Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv17A0A140T8P8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.19□□□□□ -0.46
Trbv17A0A140T8P8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Gm7977-201ENSMUST00000193787 748 ntBASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Gm45328-201ENSMUST00000210942 917 ntBASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv17A0A140T8P8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms