Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lcmt1A0A0U1RNF2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lcmt1A0A0U1RNF2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lcmt1A0A0U1RNF2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lcmt1A0A0U1RNF2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms