Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm11539-201ENSMUST00000119837 557 ntBASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm8520-201ENSMUST00000186517 868 ntBASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Gm18115-201ENSMUST00000221209 621 ntBASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13d-4A0A0G2JFX3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13d-4A0A0G2JFX3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.95□□□□□ -0.66
Trav13d-4A0A0G2JFX3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms