Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gm12895-201ENSMUST00000122214 226 ntBASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Rprl3-201ENSMUST00000157400 290 ntBASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gm44430-201ENSMUST00000203376 995 ntBASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13n-1A0A0G2JEU8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13n-1A0A0G2JEU8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms