Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav19A0A0B4J1K4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gm3375-201ENSMUST00000203929 796 ntBASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav19A0A0B4J1K4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav19A0A0B4J1K4 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Gm29707-201ENSMUST00000196325 491 ntBASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav19A0A0B4J1K4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms