Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv19A0A0B4J1H4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm10013-201ENSMUST00000106074 672 ntBASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv19A0A0B4J1H4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv19A0A0B4J1H4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv19A0A0B4J1H4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv19A0A0B4J1H4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv19A0A0B4J1H4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv19A0A0B4J1H4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv19A0A0B4J1H4 Mir770-201ENSMUST00000103252 94 ntBASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trbv19A0A0B4J1H4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Gm9987-201ENSMUST00000069768 567 ntBASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv19A0A0B4J1H4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms