Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trbv5A0A0B4J1G9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm26571-201ENSMUST00000181399 666 ntBASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm27405-201ENSMUST00000184201 112 ntBASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv5A0A0B4J1G9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv5A0A0B4J1G9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.83□□□□□ -0.35
Trbv5A0A0B4J1G9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv5A0A0B4J1G9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv5A0A0B4J1G9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv5A0A0B4J1G9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv5A0A0B4J1G9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
Trbv5A0A0B4J1G9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Actl10-202ENSMUST00000226583 1501 ntBASIC12.83□□□□□ -0.36
Trbv5A0A0B4J1G9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm11249-201ENSMUST00000117071 859 ntBASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm18958-201ENSMUST00000174258 762 ntBASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Gm9731-201ENSMUST00000209480 747 ntBASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv5A0A0B4J1G9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms