Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm10653-202ENSMUST00000139570 835 ntBASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 AC153881.1-201ENSMUST00000214448 284 ntBASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm13168-201ENSMUST00000121771 632 ntBASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav13-4-dv7A0A075B6C2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms