Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav12d-3A0A075B6A4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav12d-3A0A075B6A4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm24841-201ENSMUST00000158676 357 ntBASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav12d-3A0A075B6A4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12d-3A0A075B6A4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12d-3A0A075B6A4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Trav12d-3A0A075B6A4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav12d-3A0A075B6A4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm15375-201ENSMUST00000119510 849 ntBASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav12d-3A0A075B6A4 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms